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Ultra Sensitivity NGS Kit Agilent Femto Pulse System

Ultra Sensitivity NGS Kit Agilent Femto Pulse System

Ultra Sensitivity NGS Kit Agilent Femto Pulse System

Product catalog summary
Introduction
The document discusses the Agilent Ultra Sensitivity NGS kit used with the Agilent Femto Pulse system, designed for DNA analysis at extremely low concentrations. This system is particularly useful for next-generation sequencing (NGS) libraries, PCR-free genomic DNA library preparation, short-read library quality control, and cell-free DNA analysis.

Ultra Sensitivity NGS Kit Features
  • Enhanced Detection: Capable of visualizing DNA smears down to 5 pg/µL, conserving samples for downstream NGS library sequencing.
  • Sizing Accuracy: Reliable sizing from 100 to 6000 base pairs (bp), suitable for short-read NGS library QC and PCR-free library preparation.
  • Reliable Quantification: Allows visualization of small RNA in total RNA samples, including miRNA concentration and percentage.

Specifications
  • Kit Size: 275 samples
  • Sizing Range: 100 to 6,000 bp
  • Sizing Precision: 2% CV
  • Sizing Accuracy: ± 5% or better
  • Fragment Detection Range: 0.05 to 5 pg/µL
  • Smear Detection Range: 5 to 250 pg/µL
  • Quantification Accuracy: ± 25%
  • Quantification Precision: 15% CV
  • Maximum DNA Concentration: 5 pg/µL per DNA fragment; 250 pg/µL total

Data Analysis
The Agilent ProSize data analysis software simplifies the analysis of electrophoresis results, displaying them as gel images and electropherogram traces. It automatically calculates size, concentration, and molarity of DNA smears, providing a smear analysis function for average size and molarity calculations.

Figures
Figure 1 illustrates the analysis of DNA smears and fragments at low concentrations, showing overlays of NGS library preparations and DNA fragments at various concentrations.

Ordering Information
Kit Part No.: FP-1101-0275

Note
For research use only, not for diagnostic procedures. Information is subject to change without notice.
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Catalog excerpts

Ultra Sensitivity NGS Kit Agilent Femto Pulse System-1

Data Sheet Ultra Sensitivity NGS Kit Agilent Femto Pulse System Femtogram-level sensitivity for unparalleled DNA analysis Using the Agilent Ultra Sensitivity NGS kit on the unique Agilent Femto Pulse system, researchers can quantify and qualify DNA smears and fragments at extremely low concentrations. Together, these solutions are ideal for the analysis of next-generation sequencing (NGS) libraries, PCR-free genomic DNA (gDNA) library preparation, shortread library quality control (QC), and cell-free DNA (cfDNA) analysis. Features and benefits – Enhanced detection Ability to visualize DNA smears down to 5 pg/µL, enabling sample conservation for downstream NGS library sequencing. – Sizing accuracy Reliable sizing from 100 to 6000 bp, making the kit ideal for applications such as short-read NGS library QC, PCR-free library preparation, and cfDNA. – Reliable quantification Visualize small RNA in a total RNA sample, including the concentration and percentage of miRNA. Ordering Information Kit Agilent Ultra Sensitivity NGS kit, 275 samples

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Ultra Sensitivity NGS Kit Agilent Femto Pulse System-2

Specifications Ultra Sensitivity NGS kit Kit Size Sizing Range Sizing Precision Sizing Accuracy Figure 1. Analysis of DNA smears and fragments at extremely low concentrations. A) An overlay of an NGS library preparation at 5 pg/µL (black trace), 10 pg/µL (blue trace), and 25 pg/µL (red trace). B) An overlay of a 300 bp DNA fragment at 50 fg/µL (black trace), 130 fg/µL (blue trace), and 500 fg/µL (red trace). Fragment Detection Range (S/N>5) Smear Detection Range 2 (S/N>5) Fragment Quantitation Range 1 (S/N>10) Smear Quantitation Range (S/N>10) 5 pg/µL per DNA fragment; 250 pg/µL total Analysis...

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