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GenomSys MPEG-G Codec Suite

GenomSys MPEG-G Codec Suite

Product catalog summary
Overview
The GenomSys MPEG-G Codec Suite is a collection of CE-marked software tools designed to process genomic data in compliance with the ISO/IEC 23092 genomic data standard (MPEG-G). These tools facilitate efficient encoding, transport, and decoding of genome sequencing data, enabling organizations to implement the standard and leverage its benefits.
Wide Interoperability
The suite's conformity with an open ISO standard allows for the development of interoperable solutions that can manipulate genome sequencing data in a unified format. It is CE marked as an in-Vitro Diagnostic Medical Device, approved for clinical-grade diagnostic purposes.
Built-in Security
The MPEG-G standard includes data protection mechanisms that ensure high levels of genomic data privacy. These features support traceability, access control, and role segregation, enhancing the privacy of patients' genetic information.
High Compression
The MPEG-G standard offers significant compression benefits, reducing genomic dataset sizes by up to 70% compared to legacy formats. For example, a Whole Genome dataset can be reduced from 67.86 GB to 15.69 GB.
Rapid Selective Access
The standard's Selective Access feature allows for direct access to data without the need for initial sorting and indexing, saving up to 99% of processing time. For instance, accessing multiple regions of the CFTR gene can be reduced from 3,630.4 seconds to 1.1 seconds.
Contact Information
For more information about the GenomSys MPEG-G Codec Suite, contact GenomSys at +41 21 691 10 00 or email [email protected].
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Catalog excerpts

GenomSys MPEG-G Codec Suite-1

GenomSys Mpeg-g Codec Suite The GenomSys MPEG-G Codec Suite is a collection of CE-marked software tools to process genomic data compliant with the ISO/IEC 23092 genomic data standard (MPEG-G). The tools enable organizations to implement the standard and leverage its benefits by providing efficient encoding, transport, and decoding of genome sequencing data. 100 % High Compression The MPEG-G standard offers substantial compression benefits, reducing genomic datasets’ size by up to 70% compared to legacy formats. smaller file size smaller file size smaller file size smaller file size Figure 1 - Comparison of file sizes from Gene Panel to Whole-Genome datasets in the FASTQ format (dark grey) and the MPEG-G format (green). 100 % Rapid Selective Access¹ The standard‘s Selective Access enables direct access without the need of initially sorting and indexing the file, thus saving up to 99% of processing time. time savings time savings time savings time savings Figure 2 - Comparison of processing time for a dataset in the BAM format (light grey) and the MPEG-G format (orange) accessing multiple regions of the CFTR gene. Wide Interoperability The conformity with an open ISO standard enables everyone to develop interoperable solutions able to manipulate genome sequencing data encoded in a unified format for genome assemblies, raw and aligned sequencing data, and associated metadata. It is CE marked as in-Vitro Diagnostic Medical Device according to 98/79/CE directive and hence approved for clinical-grade diagnostic purposes. Built-in Security The new genomic standard addresses the need for a high level of genomic data privacy. The built-in data protection mechanisms support consistent traceability and precise access control, as well as role segregation. These features enable solutions providers to increase the data privacy of patients‘ genetic information. Should you be interested in learning more about GenomSys MPEG-G Codec Suite please do Suite, not hesitate to reach out to us by phone +41 21 691 10 00 or email [email protected] [email protected]. 1 The BAM file was processed with the program samtools 1.11 using the comand ´samtools view -@ 4‘ for multiple regions of the CFTR gene. This document and its contents are © GenomSys SA – 2021. All rights reserved.

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