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  3. YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf

YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf

YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf

YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf

Product catalog summary
Product Overview
The Illumina 16S NGS Library Kit (Two-Step PCR Method) is designed for preparing bacterial DNA libraries from stool samples for high-throughput sequencing on Illumina platforms. It simplifies the process by eliminating the need for DNA extraction, using a two-step PCR method to amplify the V3 and V4 regions of bacterial DNA and add sequencing adapters.
Kit Components
The kit includes reagents such as HiFi Nucleic Acid-Direct Extraction reagent, PK reagent, GTX Buffer B, 2X Ultra HiFi PCR Master Mix, 5X Illumina 16S NGS Primer Pool, and Nextera XT Index Primers.
Library Preparation Method
  • Stool Sample Processing: Mix stool sample with extraction reagents, heat, and centrifuge to obtain bacterial DNA.
  • PCR Amplification: Combine DNA with PCR Master Mix and primers, then run a thermal cycler program to amplify the DNA.
  • Purification: Use magnetic beads and ethanol washes to purify the amplified DNA.
  • Adapter Indexing: Add index primers and perform a second PCR to prepare the DNA for sequencing.
Key Procedures
  • Initial PCR involves 25 cycles of denaturation, annealing, and extension.
  • Purification steps include ethanol washes and magnetic bead separation.
  • Final PCR for adapter indexing involves 8 cycles.
Critical Information
  • Ensure all reagents are at room temperature before use.
  • Carefully follow the thermal cycler programs for successful amplification.
  • Properly handle and dispose of supernatants during purification to avoid contamination.
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Catalog excerpts

YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf-1

Illumina 16S NGS Library Kit (Two-Step PCR Method) 【Product Name】 Illumina 16S NGS Library Kit (Two-Step PCR Method) 【Packing Size】 YST0123-01,8 reactions YST0123-02,24 reactions YST0123-03,96 reactions 【Product Usage 】 Illumina 16S NGS Library Kit (Two-Step PCR Method) is a bacterial DNA library preparation kit for the Illumina high-throughput sequencing platforms. This kit is used for the direct amplification and preparation of the stool sample DNA library, and the DNA NGS library can be directly obtained without the tedious DNA extraction process. 【Product Introduction 】 This kit is capable of generate 16S DNA libraries form stool directly from stool without tedious and messy feces’ DNA purification. The kit is easy to use and only requires two steps of amplification. Bacteria V3 and V4 regions are amplified in the first step of PCR and then Illumina sequencing dual-index adapters are added in the second step of PCR. The resulted 16S DNA libraries can be sequenced on MiSeq. All the reagents provided in the kit have been thoroughly tested for quality control to ensure high performance and reproducibility. 【Kit Components】 Item HiFi Nucleic Acid-Direct Extraction reagent PK reagent GTX Buffer B 2X Ultra HiFi PCR Master Mix 5X Illumina 16S NGS Primer Pool 2X HiFi PCR Master Mix 10X Illumina Library Amplification Primer Mix Nextera XT Index 1 Primers (N7XX) Nextera XT Index 2 Primers (S5XX) 【16S Library Preparation Method】 Stool sample processing 1. Take 5-10mg of stool sample and put it in a 0.5mL tube. Add 100μL of HiFi Nucleic Acid-Direct Extraction reagent and 1μLof PK reagent to the tube, cover the tube, vortex and mix for 15 seconds, heat and shake at 650 rpm on a dry the

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YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf-2

Increase temperature and heat at 95°C for 1 minutes. Then remove the centrifuge tube and place it at room temperature. Cool to room temperature, add 100uL GTX Buffer B to the centrifuge tube after incubation, vortex and mix for 10 seconds, centrifuge at 12000 rpm/min for 1 minute, then transfer the supernatant to a clean centrifuge tube for use. This is the bacterial DNA sample for amplification. 1. Sep up the following reaction of DNA, 2X Ultra HiFi PCR Master Mix, and primers: Component 2X Ultra HiFi PCR Master Mix 5X Illumina 16S NGS Primer Pool Bacterial DNA from last step 2. Seal plate and...

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YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf-3

Use a P20 multichannel pipette with fine pipette tips to remove the residual ethanol. 10. With the Amplicon PCR plate on the magnetic stand, allow the beads to air-dry for 5 minutes. 11. Add 10 μL ddH2O to each beads’ well. Gently mix, incubate at room temperature for 3 minutes. 12. Place the plate on a magnetic stand for 3 minutes or until the supernatant has cleared. 13. Carefully transfer the supernatant to a new tube. This is the amplified 16 DNA. Step up the following reaction: Component Perform PCR on a thermal cycler using the following program: 95℃ for 2 minutes 8 cycles of: 95℃ for 30...

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YST0124-Illumina-16S-NGS-Library-Kit-Two-Step-PCR-Method-Product-Guide_v1.pdf-4

well, incubate the plate on the magnetic stand for 30 seconds. Carefully remove and discard the supernatant. 9. Use a P20 multichannel pipette with fine pipette tips to remove the residual ethanol. 10. With the Amplicon PCR plate on the magnetic stand, allow the beads to air-dry for 5 minutes. 11. Add 15μL ddH2O to each beads’ well. Gently mix, incubate at room temperature for 3 minutes. 12. Place the plate on a magnetic stand for 3 minutes or until the supernatant has cleared. 13. Carefully transfer the supernatant to a new tube. This is the final 16 DNA library for sequencing.

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